Key Publications

Key Publications

  1. Arifiyanto, A., Surtiningsih, T., Ni’matuzahroh, Fatimah, Agustina, D., and Alami, N.H. (2020). Antimicrobial activity of biosurfactants produced by actinomycetes isolated from rhizosphere of Sidoarjo mud region. Biocatal. Agric. Biotechnol.
  2. Cahyono, A.B., Wibisono, A.C., Saptarini, D., Permadi, R.I., Budisusanto, Y., and Hidayat, H. (2020). Underwater photogrammetry application for coral reef mapping and monitoring. Int. J. Adv. Sci. Eng. Inf. Technol.
  3. Jadid, N., Kurniawan, E., Himayani, C.E.S., Andriyani, Prasetyowati, I., Purwani, K.I., Muslihatin, W., Hidayati, D., and Tjahjaningrum, I.T.D. (2020). An ethnobotanical study of medicinal plants used by the Tengger tribe in Ngadisari village, Indonesia. PLoS One.
  4. Luqman, A., Muttaqin, M.Z., Yulaipi, S., Ebner, P., Matsuo, M., Zabel, S., Tribelli, P.M., Nieselt, K., Hidayati, D., and Götz, F. (2020a). Trace amines produced by skin bacteria accelerate wound healing in mice. Commun. Biol. 3, 1–10.
  5. Luqman, A., Kharisma, V.D., Ruiz, R.A., and Götz, F. (2020b). In Silico and in Vitro Study of Trace Amines (TA) and Dopamine (DOP) Interaction with Human Alpha 1-Adrenergic Receptor and the Bacterial Adrenergic Receptor QseC. Cell. Physiol. Biochem.
  6. Raue, S., Fan, S.H., Rosenstein, R., Zabel, S., Luqman, A., Nieselt, K., and Götz, F. (2020). The Genome of Staphylococcus epidermidis O47. Front. Microbiol.
  7. Soegianto, A., Putranto, T.W.C., Lutfi, W., Almirani, F.N., Hidayat, A.R., Muhammad, A., Firdaus, R.A., Rahmadhani, Y.S., Fadila, D.A.N., and Hidayati, D. (2020). Concentrations of metals in tissues of cockle anadara granosa (linnaeus, 1758) from east Java coast, Indonesia, and potential risks to human health. Int. J. Food Sci.
  8. Tribelli, P.M., Luqman, A., Nguyen, M.T., Madlung, J., Fan, S.H., Macek, B., Sass, P., Bitschar, K., Schittek, B., Kretschmer, D., et al. (2020). Staphylococcus aureus Lpl protein triggers human host cell invasion via activation of Hsp90 receptor. Cell. Microbiol. 22, 1–14.
  1. Alami, N.H., Maulidiya, L.L., Kuswytasari, N.D., Zulaika, E., and Shovitri, M. (2019). The potential of yeasts from the oil-contaminated soil and mangrove rhizosphere for degrading crude oil. Biodiversitas.
  2. Candra, Y.A., Syaifullah, M., Irawan, B., Putranto, T.W.C., Hidayati, D., and Soegianto, A. (2019). Concentrations of metals in mantis shrimp Harpiosquilla harpax(de Haan, 1844) collected from the eastern region of Java Sea Indonesia, and potential risks to human health. Reg. Stud. Mar. Sci.
  3. Hidayati, D., Oclandhi, B., Maulidinia, N., Sa’Adah, N.N., and Nurhayati, A.P.D. (2019). Short Communication: The species and body size composition of pelagic fishes that caught by troll line in the fish landing of Sendang Biru, East Java, Indonesia. Biodiversitas.
  4. Iswanto, T., Hendrianie, N., Shovitri, M., Altway, A., and Widjaja, T. (2019). The effect of mixed biological pretreatment and peg 4000 on reducing sugar production from coffee pulp waste. Int. J. Technol.
  5. Iswanto, T., Altway, A., Shovitri, M., Haikal, M., Ayustiningrum, S., and Widjaja, T. (2019). Kinetics of CO2 absorption into aqueous MDEA solution promoted by mixture of potassium salt of l-arginine and l-glutamic acid. Int. J. Adv. Sci. Eng. Inf. Technol.
  6. Iswanto, T., Shovitri, M., Altway, A., Widjaja, T., Kusumawati, D.I., and Lisdiyanti, P. (2019). Isolation and identification of caffeine-degrading bacteria from soil, coffee pulp waste and excreted coffee bean in Luwak feces. Biodiversitas.
  7. Kuswytasari, N.D., Kurniawati, A.R., Alami, N.H., Zulaika, E., Shovitri, M., Oh, K.M., Puspaningsih, N.N.T., and Ni’Matuzahroh (2019). Plastic degradation by coriolopsis Byrsina, an identified white-rot, soil-borne mangrove fungal isolate from Surabaya, east java, Indonesia. Biodiversitas.
  8. Luqman, A., Ebner, P., Reichert, S., Sass, P., Kabagema-Bilan, C., Heilmann, C., Ruth, P., and Götz, F. (2019). A new host cell internalisation pathway for SadA-expressing staphylococci triggered by excreted neurochemicals. Cell. Microbiol. 21, 1–15.
  9. Muzaki, F.K., Setiawan, E., Insany, G.F.A., Dewi, N.K., and Subagio, I.B. (2019). Community structure of echinoderms in seagrass beds of pacitan beaches, East Java, Indonesia. Biodiversitas.
  10. Muzaki, F.K., Hanifa, R., Akhwady, R., Saptarini, D., and Buharianto (2019). Short communication: Growth rate of Acropora muricata coral fragments transplanted on dome-shaped concrete artificial reef with different composition. Biodiversitas.
  11. Muzaki, F.K., Saptarini, D., and Ibadah, A.S. (2019). Juvenile and small fish diversity in mangroves of different root types in the Labuhan coastal area, Bangkalan, Indonesia. Biodiversitas.
  12. Oktafitria, D.W.I., Febriyantiningrum, K., Jadid, N., Nurfitria, N.I.A., Rahmadani, F., Amrullah, A., and Hidayati, D. (2019). Short communication: Assessment of reclamation success of former limestone quarries in Tuban, Indonesia, based on soil arthropod diversity and soil organic carbon content. Biodiversitas.
  13. Saputro, T.B., Prayogo, Y., Rohman, F.L., and Alami, N.H. (2019). The virulence improvement of Beauveria bassiana in infecting Cylas formicarius modulated by various chitin based compounds. Biodiversitas.
  14. Saputro, T.B., Muslihatin, W., Wahyuni, D.K., Nurhidayati, T., Wardhani, F.O., and Rosalia, E. (2019). Variation induction of Glycine max through low dose gamma irradiation produces genetic and physiological alteration as source of tolerant variants in waterlogging conditions. Biodiversitas.
  15. Saputro, T.B., Purwani, K.I., Ermavitalini, D., and Saifulloh, A.F. (2019). Isolation of high lipid content microalgae from wonorejo river, Surabaya, Indonesia and its identification using rbcL marker gene. Biodiversitas.
  16. Setiawan, E., Muzaki, F.K., Nurhayati, A.P.D., and Maulidina, N. (2019). Record of shallow-water sponges in Simeulue Island, Aceh Province, Indonesia. Biodiversitas.
  17. Susanto, D.F., Aparamarta, H.W., Widjaja, A., Jadid, N., and Gunawan, S. (2019). Isolation and identification of cholestane and dihydropyrene from Calophyllum inophyllum. Heliyon.
  18. Trisnawati, I., Muryono, M., and Desmawati, I. (2019). The impact of herbivorous insect on leaves of mangrove species Rhizophora stylosa and its relation to leaf nutrient level. Biodiversitas.
  19. Wijaya, D.R., Sarno, R., and Zulaika, E. (2019). Noise filtering framework for electronic nose signals: An application for beef quality monitoring. Comput. Electron. Agric.
  1. Ebner, P., Reichert, S., Luqman, A., Krismer, B., Popella, P., and Götz, F. (2018). Lantibiotic production is a burden for the producing staphylococci. Sci. Rep.
  2. Hidayati, D., Ismail, B.S., Shuhaimi-Othman, M., and Sulaiman, N. (2018). Chemical composition of a mud volcano LUSI and the health risk involved based on the air quality index that occurred as a result of disastrous gas exploration drilling activities in Sidoarjo, Indonesia. Sains Malaysiana.
  3. Jadid, N., Arraniry, B., Hidayati, D., Purwani, K., Wikanta, W., Hartanti, S., and Rachman, R. (2018a). Proximate composition, nutritional values and phytochemical screening of Piper retrofractum vahl. fruits. Asian Pac. J. Trop. Biomed.
  4. Jadid, N., Mardika, R.K., Purwani, K.I., Permatasari, E.V., Prasetyowati, I., and Irawan, M.I. (2018b). Transcription profile data of phorbol esters biosynthetic genes during developmental stages in Jatropha curcas. Data Br.
  5. Luqman, A., Nega, M., Nguyen, M.T., Ebner, P., and Götz, F. (2018). SadA-Expressing Staphylococci in the Human Gut Show Increased Cell Adherence and Internalization. Cell Rep. 22, 535–545.
  6. Nguyen, M.T., Luqman, A., Bitschar, K., Hertlein, T., Dick, J., Ohlsen, K., Bröker, B., Schittek, B., and Götz, F. (2018). Staphylococcal (phospho)lipases promote biofilm formation and host cell invasion. Int. J. Med. Microbiol.
  7. Nguyen, M.T., Peisl, L., Solari, F.B., Luqman, A., and Götz, F. (2018). Toll-like receptor 2 and lipoprotein-like lipoproteins enhance Staphylococcus aureus invasion in epithelial cells. Infect. Immun.
  8. Nurhatika, S., Ermavitalin, D., Saputro, T.B., and Apriyatmoko, Y. (2018). Biodiversity and characterization of high lipid content microalgae in Porong river estuary East Java, Indonesia. Biodiversitas.
  9. Purnobasuki, H., Nurhidayati, T., Hariyanto, S., and Jadid, N. (2018). Data of root anatomical responses to periodic waterlogging stress of tobacco (Nicotiana tabacum) varieties. Data Br.
  10. Reichert, S., Ebner, P., Bonetti, E.J., Luqman, A., Nega, M., Schrenzel, J., Spröer, C., Bunk, B., Overmann, J., Sass, P., et al. (2018). Genetic adaptation of a mevalonate pathway deficient mutant in Staphylococcus aureus. Front. Microbiol.
  11. Setiawan, E., Erpenbeck, D., Wörheide, G., and De Voogd, N.J. (2018). Bearing the wrong identity: A case study of an Indo-Pacific common shallow water sponge of the genus Neopetrosia (Haplosclerida; petrosiidae). Zootaxa.
  12. Wijaya, D.R., Sarno, R., and Zulaika, E. (2018). Electronic nose dataset for beef quality monitoring in uncontrolled ambient conditions. Data Br.
  1. Ebner, P., Luqman, A., Reichert, S., Hauf, K., Popella, P., Forchhammer, K., Otto, M., and Götz, F. (2017). Non-classical Protein Excretion Is Boosted by PSMα-Induced Cell Leakage. Cell Rep. 20, 1278–1286.
  2. Hidayati, D., Sulaiman, N., Ismail, B.S., Shuhaimi-Othman, M., and De Bellard, M.E. (2017). Evaluation of the effect of Sidoarjo mud on aquatic life using chromatophores and the microstructure of fish scales. Sains Malaysiana.
  3. Muryono, M., Chen, C.P., Sakai, H., Tokida, T., Hasegawa, T., Usui, Y., Nakamura, H., and Hikosaka, K. (2017). Nitrogen distribution in leaf canopies of high-yielding rice cultivar Takanari. Crop Sci.
  4. Wijaya, D.R., Sarno, R., and Zulaika, E. (2017). Information Quality Ratio as a novel metric for mother wavelet selection. Chemom. Intell. Lab. Syst.
  5. Wijaya, D.R., Sarno, R., Zulaika, E., and Sabila, S.I. (2017). Development of mobile electronic nose for beef quality monitoring. In Procedia Computer Science, p.
  1. Ebner, P., Rinker, J., Nguyen, M.T., Popella, P., Nega, M., Luqman, A., Schittek, B., Di Marco, M., Stevanovic, S., and Götza, F. (2016). Excreted cytoplasmic proteins contribute to pathogenicity in Staphylococcus aureus. Infect. Immun.
  2. Setiawan, E., De Voogd, N.J., Hooper, J.N.A., Wörheide, G., and Erpenbeck, D. (2016). Bottomless barrel-sponge species in the Indo-Pacific? Zootaxa.
  1. Nugroho Prasetyo, E., Rodríguez, R.D., Lukesch, B., Weiss, S., Murkovic, M., Katsoyannos, E., Sygmund, C., Ludwig, R., Nyanhongo, G.S., and Guebitz, G.M. (2015). Laccase–cellobiose dehydrogenase-catalyzed detoxification of phenolic-rich olive processing residues. Int. J. Environ. Sci. Technol.
  2. Prasetyo, E.N., Semlitsch, S., Nyanhongo, G.S., Lemmouchi, Y., and Guebitz, G.M. (2015). Laccase functionalized cellulose acetate for the removal of toxic combustion products. React. Funct. Polym.
  1. Flitsch, A., Prasetyo, E.N., Sygmund, C., Ludwig, R., Nyanhongo, G.S., and Guebitz, G.M. (2013). Cellulose oxidation and bleaching processes based on recombinant Myriococcum thermophilum cellobiose dehydrogenase. Enzyme Microb. Technol.
  2. Nyanhongo, G.S., Sygmund, C., Ludwig, R., Prasetyo, E.N., and Guebitz, G.M. (2013a). An antioxidant regenerating system for continuous quenching of free radicals in chronic wounds. Eur. J. Pharm. Biopharm.
  3. Nyanhongo, G.S., Rodríguez, R.D., Prasetyo, E.N., Caparrós, C., Ribeiro, C., Sencadas, V., Lanceros-Mendez, S., Acero, E.H., and Guebitz, G.M. (2013b). Bioactive albumin functionalized polylactic acid membranes for improved biocompatibility. React. Funct. Polym.
  4. Nyanhongo, G.S., Sygmund, C., Ludwig, R., Prasetyo, E.N., and Guebitz, G.M. (2013c). Synthesis of multifunctional bioresponsive polymers for the management of chronic wounds. J. Biomed. Mater. Res. – Part B Appl. Biomater.
  5. Quaranta, M., Nugroho Prasetyo, E., Koren, K., Nyanhongo, G.S., Murkovic, M., Klimant, I., and Guebitz, G.M. (2013). Enzyme-based online monitoring and measurement of antioxidant activity using an optical oxygen sensor coupled to an HPLC system. Anal. Bioanal. Chem.
  6. Swierts, T., Peijnenburg, K.T.C.A., de Leeuw, C., Cleary, D.F.R., Hörnlein, C., Setiawan, E., Wörheide, G., Erpenbeck, D., and de Voogd, N.J. (2013). Lock, Stock and Two Different Barrels: Comparing the Genetic Composition of Morphotypes of the Indo-Pacific Sponge Xestospongia testudinaria. PLoS One.
  7. Thallinger, B., Prasetyo, E.N., Nyanhongo, G.S., and Guebitz, G.M. (2013). Antimicrobial enzymes: An emerging strategy to fight microbes and microbial biofilms. Biotechnol. J.
  1. Nyanhongo, G.S., Nugroho Prasetyo, E., Herrero Acero, E., and Guebitz, G.M. (2012). Engineering strategies for successful development of functional polymers using oxidative enzymes. Chem. Eng. Technol.
  2. Prasetyo, E.N., Kudanga, T., Fischer, R., Eichinger, R., Nyanhongo, G.S., and Guebitz, G.M. (2012a). Enzymatic synthesis of lignin-siloxane hybrid functional polymers. Biotechnol. J.
  3. Prasetyo, E.N., Willibald, W., Nyanhongo, G.S., and Guebitz, G.M. (2012b). A unique two-way approach for the validation of total antioxidant capacity of serum samples. Eur. J. Clin. Invest.
  1. Kudanga, T., Prasetyo, E.N., Widsten, P., Kandelbauer, A., Jury, S., Heathcote, C., Sipilä, J., Weber, H., Nyanhongo, G.S., and Guebitz, G.M. (2010a). Laccase catalyzed covalent coupling of fluorophenols increases lignocellulose surface hydrophobicity. Bioresour. Technol.
  2. Kudanga, T., Prasetyo, E.N., Sipilä, J., Nyanhongo, G.S., and Guebitz, G.M. (2010b). Enzymatic grafting of functional molecules to the lignin model dibenzodioxocin and lignocellulose material. Enzyme Microb. Technol.
  3. Kudanga, T., Prasetyo, E.N., Sipilä, J., Guebitz, G.M., and Nyanhongo, G.S. (2010c). Reactivity of long chain alkylamines to lignin moieties: Implications on hydrophobicity of lignocellulose materials. J. Biotechnol.
  4. Kudanga, T., Prasetyo, E.N., Sipilä, J., Nyanhongo, G.S., and Guebitz, G.M. (2010d). Chemo-enzymatic functionalisation of lignocellulose materials using oxiranes. Process Biochem.
  5. Mialoundama, A.S., Heintz, D., Jadid, N., Nkeng, P., Rahier, A., Deli, J., Camara, B., and Bouvier, F. (2010). Characterization of plant carotenoid cyclases as members of the flavoprotein family functioning with no net redox change. Plant Physiol.
  6. Nugroho Prasetyo, E., Kudanga, T., Østergaard, L., Rencoret, J., Gutiérrez, A., del Río, J.C., Ignacio Santos, J., Nieto, L., Jiménez-Barbero, J., Martínez, A.T., et al. (2010a). Polymerization of lignosulfonates by the laccase-HBT (1-hydroxybenzotriazole) system improves dispersibility. Bioresour. Technol.
  7. Nugroho Prasetyo, E., Kudanga, T., Steiner, W., Murkovic, M., Nyanhongo, G.S., and Guebitz, G.M. (2010b). Laccase-generated tetramethoxy azobismethylene quinone (TMAMQ) as a tool for antioxidant activity measurement. Food Chem.
  8. Prasetyo, E.N., Kudanga, T., Steiner, W., Murkovic, M., Wonisch, W., Nyanhongo, G.S., and Guebitz, G.M. (2010). Cellular and plasma antioxidant activity assay using tetramethoxy azobismethylene quinone. Free Radic. Biol. Med.
  9. Reyes, M., Zandberg, K., Desmawati, I., and De Bellard, M.E. (2010). Emergence and migration of trunk neural crest cells in a snake, the California Kingsnake (Lampropeltis getula californiae). BMC Dev. Biol.
  10. Widsten, P., Heathcote, C., Kandelbauer, A., Guebitz, G., Nyanhongo, G.S., Prasetyo, E.N., and Kudanga, T. (2010). Enzymatic surface functionalisation of lignocellulosic materials with tannins for enhancing antibacterial properties. Process Biochem.
  1. Kudanga, T., Nugroho Prasetyo, E., Sipilä, J., Eberl, A., Nyanhongo, G.S., and Guebitz, G.M. (2009). Coupling of aromatic amines onto syringylglycerol β-guaiacylether using Bacillus SF spore laccase: A model for functionalization of lignin-based materials. J. Mol. Catal. B Enzym.
  2. Nugroho Prasetyo, E., Kudanga, T., Steiner, W., Murkovic, M., Nyanhongo, G.S., and Guebitz, G.M. (2009). Antioxidant activity assay based on laccase-generated radicals. Anal. Bioanal. Chem.
  1. Kudanga, T., Prasetyo, E.N., Sipilä, J., Nousiainen, P., Widsten, P., Kandelbauer, A., Nyanhongo, G.S., and Guebitz, G. (2008). Laccase-mediated wood surface functionalization. Eng. Life Sci.
  2. Wegener, G., Shovitri, M., Knittel, K., Niemann, H., Hovland, M., and Boetius, A. (2008). Biogeochemical processes and microbial diversity of the Gullfaks and Tommeliten methane seeps (Northern North Sea). Biogeosciences.

Books

  1. Aunurohim, and Kuswytasari, N.D. (2020). Plastik dan Mikroplastik (Media Bersaudara Publisher).
  2. Hidayati, D., Ashuri, N.M., and Arifudin, S. (2018). Nearshore aquaculture: keramba jaring apung (KJA) teknik budidaya dan penanggulangan penyakit (Pusat Studi Kelautan LPPM ITS).
  3. Kuswytasari, N.D. (2014). Pengembangan Bahan Baku Lokal pada Produk Unggulan Makanan dan Minuman Kota Mojokerto dalam pengelolaan UMKM berbasis SIDa (LPPM ITS).
  4. Muzaki, F.K., Saptarini, D., Tjahyaningrum, I.T.D., Aunurohim, Muryono, M., and Desmawati, I. (2019). Panduan Lapangan: Identifikasi Jenis Mangrove Pesisir Jawa Timur (Laboratorium Ekologi, Biology Department).
  5. Nurhayati, A.P.D., Setiawan, E., and Sa’adah, N.N. PERKEMBANGAN HEWAN (ITS Press).
  6. Nurhayati, A.P.D., Santoso, M., Setiawan, E., MAHBUBILLAH, A., KURNIALLAH, W., ARIFUDIN, S., PRATIWI, B.H., and LIANINGSIH, F. (2019). Bahan Alam Laut : Perspektif Memahami Senyawa Metabolit Berbasis Riset (Sinar Gamedia).
  7. Nurhidayati, A.P.D., and Ashuri, N.M. (2019). Struktur hewan (CV. Sinar Gamedia).
  8. Nyanhongo, G.S., Prasetyo, E.N., Kudanga, T., and Guebitz, G. (2010). Grafting of functional molecules: Insights into peroxidase-derived materials. In Biocatalysis Based on Heme Peroxidases: Peroxidases as Potential Industrial Biocatalysts, p.
  9. Nyanhongo, G.S., Kudanga, T., Prasetyo, E.N., and Guebitz, G.M. (2011). Enzymatic polymer functionalisation: Advances in laccase and peroxidase derived lignocellulose functional polymers. Adv. Biochem. Eng. Biotechnol.
  10. Nyanhongo, G.S., Prasetyo, E.N., Acero, E.H., and Guebitz, G.M. (2012). Advances in the application of oxidative enzymes in biopolymer chemistry and biomaterial research. ACS Symp. Ser.
  11. Saptarini, D., Marzuki, F.K., Kuswytasari, N.D., and Sulisetyono, A. (2012). Menjelajah Mnagrove Surabaya (Pusat Studi Kelautan LPPM ITS).

Patents

  • Nugroho Prasetyo E, Lemmouchi Y, Nyanhongo GS, Guebitz G (2012) Enzymes in Smoking Article Filters. British American Tobacco UA Disclosure #795, P10011711.
  • Muslihatin, W. Growth medium for synthetic seed of Moringa oleifera (submitted). PID2019015506
  • Nurhidayati, T. Mycorrhizal Propagules Making Method And Uses. HKI-3-HI.05.02.01.P00201304626-TA